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Yeast

The Tiny Organism
that Changed the World

From brewing beer in ancient Rome to making biofuels in high-tech labs, yeast has been shaping human life for thousands of years. Explore its journey through history and see how this tiny fungus is still driving innovation today!

The history of yeast
8,000–7,000 BCE

Yeast Originates in China

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Recent genomic studies show Saccharomyces cerevisiae (the yeast used in bread and beer today) originated in China, spreading westward via the early Silk Road. They brewed a mead-like drink made from rice, honey, and fruit.

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Photo by YE JUNHAO, Unsplash
6,000 BCE

Beer & Wine Brewing in Sumer, Babylonia & Georgia

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Fermentation practices using yeast were observed in ancient Sumer and Babylonia for beer and wine, as well as early winemaking in present-day Georgia.

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AI generated
1,300-1,500 BCE

Bread Baking in Ancient Egypt

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Egyptians developed leavened bread using wild yeast, coinciding with beer brewing.

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Ancient Egypt Terracotta Figurine Kneading Bread. By Gary Lee Todd, Ph.D., Creative Commons
500–300 BCE

Bread Baking in Ancient China

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Archaeological findings reveal sourdough bread production using yeast in China, specifically in the Subeixi cemetery.

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Eastern Han mural of husband and wife's banquet, discovered in Zhucun, Luoyang. Public Domain.
168 BCE

Roman Bakers

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Pliny the Elder records that professional bakers using yeast-based techniques emerged in Rome around this time.

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Wikipedia
1680 CE

Discovery of Yeast Under Microscope

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Anton van Leeuwenhoek describes yeast's microscopic appearance, marking the first visual identification. This type of microscope was invented and used by Leeuwenhoek (1632-1723).

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Wellcome Images, Creative Commons Attribution 4.0
1859 CE

Term “Yeast” Defined

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J.H. van den Broek defines yeast as vegetative cells in fermentation, separating it from other forms. The word “yeast” as we know it today was not associated with fermentation until 1859, when J.H. van den Broek, working in Utrecht, Netherlands, identified vegetative cells that existed and replicated in fermenting forms, which he dubbed "Gist" which sounds like yeast.

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Giphy
1780s–1790s

Fresh Commercial Yeast for Baking was Developed

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Compressed yeast production begins in England, Germany, and the Netherlands, streamlining commercial bread baking.

Image:
Maria Tran @ Giphy / mariatran.dk
1857 CE

Pasteur’s Fermentation Discovery

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Louis Pasteur confirms yeast as a living organism essential to fermentation, revolutionizing microbiology. When Pasteur described/discovered the fermentation process, he established the key role of yeast as the microorganism responsible for alcoholic fermentation. He unveiled these mysteries by proving that the yeast cell can live with or without oxygen.

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The original Pasteur Patent application. Archives.gov
1891 CE

First Sterile Yeast Production Patent

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Alfred Jörgensen & Axel Bergh filed the first yeast production patent emphasizing sterility and modernizing yeast manufacturing. The first known patent that followed Pasteur’s insistence on the sterility of both media and equipment was in 1891, by Jörgensen and Bergh in Sweden. Sterility helps to ensure that no other microbes (yeast or bacteria) are present that could contaminate the fermentation.

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Alfred Jørgensen. Source unknown.
1996 CE

First Eukaryote Genome Sequenced

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Yeast becomes the first eukaryote with its genome fully sequenced, showing genetic similarities to humans. By May 1996, the first complete genome sequence of a eukaryote, the yeast Saccharomyces cerevisiae, was obtained. At that time, it was the largest genome sequenced to date. It contains just over 12 million base pairs packaged in 16 chromosomes. Yeast has approximately 6,000 genes in all and roughly a third of these genes are related to human genes.

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2019 CE–Present

Recent: Revival of Ancient Yeasts

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Yeast can survive for thousands of years and contributes to the understanding of ancient food and beverage habits. Researchers have revived yeast from 5000-year-old clay vessels, extracting it from microscopic pores in ancient pottery. Team up archaeologists, microbiologists, and a craft brewer, and they got a modern spicy and fruity ale beer. Ancient culinary practices in modern day. Cheers!

Image:
master1305, iStockphoto.com
Picture of Stegano Donati

Gases, acids and alcohol. This is fermentation.

Fermentation is nature’s way of transforming one thing into another. It’s a biological process where yeast and other microbes break down sugars and convert them into gases, acids and/or alcohol. This is what makes bread dough rise, turns grape juice into wine and preserves foods like kimchi and cheese. But fermentation isn’t just about food — it’s a chemical superpower that life on Earth has been using for billions of years.

Fermentation in Biotech
Stefano Donati
Researcher, Co-PI

The dough

In dough, yeast consumes carbohydrates (sugars), releasing CO₂ bubbles that get trapped and make bread fluffy.

It is a simple chemistry that transforms humanity

C6H12O6 (glucose) + 2 ADP + 2 Pi → 2 C2H5OH (ethanol) + 2 CO2 + 2 ATP

A simple reaction that is the basis for alcoholic beverages, bread dough, savory food, ethanol fuel, plant-based plastics, and much more.

Want to know how it really happens?
Yeah... its yeast
Yeah... its yeast
The word "yeast" comes from the Old English "gist" or "gest", which itself comes from the Proto-Germanic word "jestaz", meaning "foam" or "to bubble." Yeast, and other fungi, are neither animals nor plants; they are a whole kingdom unto themselves called Mycota.
All rise!
All rise!

During fermentation yeast produces bubbles of gas (CO2) – especially in bread dough or brewing liquids – making things rise or froth. It also produces alcohol (ethanol) which has been a part of many cultures since the dawn of civilization.

Fermentation is nothing more than anaerobic respiration, meaning that cells break down sugars to produce energy without using oxygen.
I breathe; you change the world!
I breathe; you change the world!

Bread Rising Miracle

Sourdough bread stays fresh longer thanks to tiny helpers — bacteria and yeasts! Lactic acid bacteria like Lactobacillus make it tangy and tough for mold to grow, while yeasts add flavor and preservation power. These microbes team up to keep your loaf tasty and safe, naturally.

Lactic acid bacteria (LAB) like Lactobacillus sanfranciscensis pump out acids and antimicrobial stuff that stop mold and bad bacteria in their tracks. It’s like a natural shield keeping your sourdough fresh for days — perfect for busy life!

With time, the starter will change depending on how often you feed it, what you feed it, the temperature you keep it in and its pH. Over time the outputs produced by the starter microbial community will make some of the original microbes die or fade out completely, allowing other microbes to thrive or colonize the starter.
Now you know me, now you don’t
Now you know me, now you don’t
Where Microbes Grow Wild
Where Microbes Grow Wild
The mix of naturally occurring microbes and yeasts in the starter dough can be extremely varied; it all depends on where your starter comes from and the environment it grows in. There are no two identical starter doughs! That is why sourdough bread can taste so different.
Acidic Vibes Keep It Fresh
Acidic Vibes Keep It Fresh
The sour taste isn’t just cool – it’s science! Acids from fermentation lower the bread’s pH, making it a no-go zone for spoilage. That means less waste and more late-night study snacks without needing a fridge.
Teamwork Makes the Dream Work
Teamwork Makes the Dream Work

Yeasts and bacteria in sourdough are BFFs. Yeasts like Candida milleri team up with LAB to create alcohol and acids that lock out mold. It’s a party in your loaf that keeps it fresh longer – no chemicals needed!

I propose a toast

Did you know that tiny microbes like yeast are behind some of humanity’s favorite drinks? In winemaking, yeast plays a starring role by fermenting grape sugars into alcohol and carbon dioxide, transforming simple juice into wine. This process, studied in microbiology, not only creates delicious flavors but also connects science to everyday life. Exploring yeast’s power could inspire you to a career where microbes solve big problems!

Bacteria Make Wine Sweeter

Fermentation by yeast produces the alcohol, but it is Malolactic decarboxylation by bacteria (the loss of CO2 from a molecule) that removes the acidity of wines. By converting malic acid (naturally occurring in grapes) to lactic acid, bacteria make wines softer/rounder, mostly in mouthfeel. Cooperation always gives better results!

Yeast doesn’t just make alcohol – it crafts wine’s unique taste. Different yeast strains produce aromas like fruit or spice, giving each wine its personality. Microbiologists study these traits to perfect the sip!
Flavor Creators
Flavor Creators
Yeast’s Ancient Role
Yeast’s Ancient Role
Yeast has been helping humans make wine for over 7,000 years! Archaeologists found evidence of winemaking in ancient Georgia, where wild yeasts naturally fermented grapes, showing how microbes have long been our partners.
The Toast Tradition
The Toast Tradition
Ever wonder why we “propose a toast”? It started in ancient Rome, where a piece of toasted bread was dropped into wine to improve its flavor – thanks to yeast’s fermentation. Today, it’s a cheers to good times!

Beyond proposing a toast:

Yeast at scale

Yeast is a powerhouse in labs and factories. Scientists have learned to engineer yeast at an industrial scale, tweaking its genetic code to produce valuable compounds that go far beyond bread and beer.

Lab Flask Experiment Streamline Icon: https://streamlinehq.com
See what goes on in the lab!
Are you alive? Wake up!
Are you alive? Wake up!

The first step is to thaw the sample and plate them to see if the yeast has survived and can still grow and reproduce. In petri dishes, tubes and then flasks, a tiny amount of engineered yeast is grown and expanded under ideal conditions of temperature, pH, oxygen, nutrients.

A few starter cells multiply into billions, enough to see if they can work as efficient cell factories for our product. These healthy, productive yeast cells are the foundation for everything that comes next in the lab or factory.

Yeast loves it warm
Yeast loves it warm
Optimal yeast growth usually happens around 30°C—just a bit warmer than room temperature. That’s why incubators are key to helping them multiply rapidly in early stages. They also require a specific amount of oxygen, pH, humidity, and nutrients. All must be perfect for them to grow.
You need to know your yeast
You need to know your yeast
Each biotech product starts with a carefully selected yeast strain engineered for a specific task – like producing insulin, dye, milk protein, or bioethanol. This engineered cell is called a cell factory. It will have specific growth conditions and requirements. Success depends on the researcher knowing all its hidden details.
Step 1

From a few dormant cells to billions

Shaker incubator
Every biotech process begins small — literally. When a new cell factory arrives at a pilot facility to validate if the process can be done at industrial levels, it comes in the form of a few microliters of frozen yeast. This small sample has the potential to change the world by producing almost anything we can imagine; it is all up to the scientists that engineer it.
Step 2

Fermentation — Turning Sugar into Solutions

Fermenter
During fermentation, cell factories (engineered yeast) produce valuable compounds like proteins, enzymes, or alcohols. In stainless-steel tanks called fermenters, yeast cells are fed sugar-rich nutrients and allowed to grow and work. This multi-step process goes from fermenting in a small bench-top fermenter to semi-industrial scale. This is called scaling-up, a process needed to determine if what works in the lab would also work for mass production.
Custom recipes
Custom recipes
Each fermentation uses a tailored "feed" of sugars and nutrients. Even slight changes in the recipe can impact the yield and purity of the final product. Sometimes the fermenting process is done several times until the right conditions are found. In certain cases, the engineers that control this process have to adapt the machines themselves in order to make the fermentation work at large scale.
One step at a time
One step at a time
Scaling-up is a long and time-consuming process that can go wrong at many stages. Fermentation specialists will first make sure that the cell factory is able to produce what it was engineered for in a small fermenter. If this works, then they start trying them out in a bigger fermenter that will mimic the industrial settings.
Bigger than it looks
Bigger than it looks

Industrial fermenters can hold thousands of liters – enough to fill a small swimming pool with yeast culture bubbling away.

Step 3

Harvesting — Getting Out the Good Stuff

Harvest-Centrifuge
After fermentation, the mixture is full of yeast cells and liquid. To separate them, the culture is spun in a centrifuge – like a giant salad spinner on steroids. The dense yeast cells settle in the bottom, and the liquid (called supernatant) containing the valuable product that yeast has secreted is collected from the top.
Let’s go circular!
Let’s go circular!

Some byproducts, what before was considered waste, are now used as food for new cell factories or as raw material to create new products. This is an example of creating a circular economy, where nothing goes to waste and all can be reused for something else. True circularity though, has not been achieved, as a lot of CO2 is produced which remains unused. Maybe you can be the first to find a way?

Time to purify
Time to purify

This clear liquid may contain nutrients, (spent media and products produced by yeast which are of no interest (byproducts) as well as the product you want to manufacture. The next step is to isolate the product from all the other things in the supernatant.

This is called purification. It is usually a multi-step process requiring different types of machines and procedures, such as microfiltration, ultrafiltration, and chromatography, where you separate things according to their weight, size, and chemical composition.

Yeast can be recycled!
Yeast can be recycled!
In some setups, the yeast is collected and reused in new fermentation batches – saving time, resources, and costs. Sometimes, the yeast is also used as a product for different types of yeast extract after being used for production.
Step 4

We made it: 1 mg of pure product!

Chromatographer
We are almost there! Now all we have to do is isolate the product, so no contaminants remain and characterize it to make sure the final product is pure, stable, and safe for use in food, medicine, or materials.

The final analysis

Once purified, the product is cleaned for any impurities it might have through filtration and changing solutions (buffer exchange). It is then analyzed for purity. The level of purity depends on its final use, for example: pharma requires high purity, food no toxicity, and household products require that the functionality is not affected by the impurities. You also must make different chemical analyses to determine that the product complies with the requirements needed (activity, solubility, toxicity, reactivity, stability, etc.). Once cleared, it is prepared for shipment to be tested in the real world!
Time to get frozen!
Time to get frozen!
The product is then freeze-dried into a powder (unless required as liquid) for easy storage and transport. Drying also preserves the product without damaging it, meaning it can travel the globe and last for months on a shelf!
Beyond the bakery
Beyond the bakery
Modern yeast products are used in packaging, fabrics, detergents, agriculture, and even space tech. It's the ultimate glow-up! It also provides new technology for a more sustainable future where we take care of the environment, and it enables a circular economy. What is there not to like!
Use of yeast for sustainable solutions
Emil Damgaard Jensen
Researcher, Group Leader

A tiny ally for a sustainable future

Yeast isn’t just for baking bread or brewing beer — it’s a powerful tool for building a better world. In the way that yeast can produce ethanol/alcohol, scientists are now able to engineer yeast to produce other things such as medicines and sustainable materials. Engineered yeast can also help clean up pollution and help us solve big problems in smart, natural ways.

With science and curiosity, we can keep unlocking its potential to live more sustainably every day.

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